Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.37■□□□□ 0.53
Usp43Q8BUM9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Gm44549-201ENSMUST00000208351 577 ntBASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp43Q8BUM9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp43Q8BUM9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp43Q8BUM9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp43Q8BUM9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.33■□□□□ 0.53
Usp43Q8BUM9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Usp43Q8BUM9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.33■□□□□ 0.53
Usp43Q8BUM9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp43Q8BUM9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp43Q8BUM9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp43Q8BUM9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.32■□□□□ 0.52
Usp43Q8BUM9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.31■□□□□ 0.52
Usp43Q8BUM9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp43Q8BUM9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms