Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Gm18025-201ENSMUST00000221733 862 ntBASIC19.25■□□□□ 0.67
Rd3Q8BRE0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Gm38285-201ENSMUST00000192928 922 ntBASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rd3Q8BRE0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rd3Q8BRE0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.22■□□□□ 0.67
Rd3Q8BRE0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Gm11643-201ENSMUST00000119578 864 ntBASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rd3Q8BRE0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rd3Q8BRE0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rd3Q8BRE0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms