Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpsf4Q8BQZ5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.58■□□□□ 0.41
Cpsf4Q8BQZ5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpsf4Q8BQZ5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Gm6365-201ENSMUST00000054711 744 ntBASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Gm10602-201ENSMUST00000098239 609 ntBASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf4Q8BQZ5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf4Q8BQZ5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Gm13148-201ENSMUST00000118892 745 ntBASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4Q8BQZ5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4Q8BQZ5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Mir5133-201ENSMUST00000174955 77 ntBASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms