Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Smco3Q8BQM7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smco3Q8BQM7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smco3Q8BQM7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smco3Q8BQM7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.95□□□□□ -0.02
Smco3Q8BQM7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smco3Q8BQM7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.94□□□□□ -0.02
Smco3Q8BQM7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Gm22238-201ENSMUST00000175222 88 ntBASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smco3Q8BQM7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smco3Q8BQM7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms