Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col16a1Q8BLX7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Mir5130-201ENSMUST00000175160 84 ntBASIC24■■□□□ 1.43
Col16a1Q8BLX7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col16a1Q8BLX7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col16a1Q8BLX7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Col16a1Q8BLX7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Gm17971-201ENSMUST00000190239 806 ntBASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col16a1Q8BLX7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Gm18101-201ENSMUST00000215769 548 ntBASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Col16a1Q8BLX7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Gm4217-201ENSMUST00000182243 1002 ntBASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Col16a1Q8BLX7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col16a1Q8BLX7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Col16a1Q8BLX7 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col16a1Q8BLX7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 AC159205.3-201ENSMUST00000224614 874 ntBASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col16a1Q8BLX7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms