Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdkl3Q8BLF2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Gm15820-201ENSMUST00000201566 728 ntBASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl3Q8BLF2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cdkl3Q8BLF2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Gm5812-201ENSMUST00000061073 957 ntBASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl3Q8BLF2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Cdkl3Q8BLF2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdkl3Q8BLF2 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms