Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2bQ8BJF9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2bQ8BJF9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2bQ8BJF9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.53■□□□□ 0.56
Chmp2bQ8BJF9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp2bQ8BJF9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp2bQ8BJF9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp2bQ8BJF9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp2bQ8BJF9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp2bQ8BJF9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp2bQ8BJF9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp2bQ8BJF9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp2bQ8BJF9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Chmp2bQ8BJF9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms