Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Gm7291-201ENSMUST00000199147 382 ntBASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn3Q8BHH8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn3Q8BHH8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn3Q8BHH8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Clrn3Q8BHH8 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.96■□□□□ 0.3
Clrn3Q8BHH8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Clrn3Q8BHH8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clrn3Q8BHH8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn3Q8BHH8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn3Q8BHH8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Gm12933-201ENSMUST00000120203 872 ntBASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn3Q8BHH8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms