Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim23Q8BGX0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Gm5643-201ENSMUST00000117081 966 ntBASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim23Q8BGX0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim23Q8BGX0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim23Q8BGX0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Gm13158-201ENSMUST00000122007 736 ntBASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim23Q8BGX0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Gm18666-201ENSMUST00000190039 958 ntBASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim23Q8BGX0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.41■□□□□ 0.38
Trim23Q8BGX0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms