Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Gm26833-201ENSMUST00000180899 440 ntBASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smndc1Q8BGT7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smndc1Q8BGT7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smndc1Q8BGT7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.53■□□□□ 0.4
Smndc1Q8BGT7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Gm40848-201ENSMUST00000221998 324 ntBASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.52■□□□□ 0.4
Smndc1Q8BGT7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smndc1Q8BGT7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.52■□□□□ 0.39
Smndc1Q8BGT7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smndc1Q8BGT7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms