Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Samm50Q8BGH2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Samm50Q8BGH2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Samm50Q8BGH2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Samm50Q8BGH2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Mir5133-201ENSMUST00000174955 77 ntBASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.17■□□□□ 0.98
Samm50Q8BGH2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Gm6365-201ENSMUST00000054711 744 ntBASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Samm50Q8BGH2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Samm50Q8BGH2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Samm50Q8BGH2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Samm50Q8BGH2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Samm50Q8BGH2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Samm50Q8BGH2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Samm50Q8BGH2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Samm50Q8BGH2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Samm50Q8BGH2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.14■□□□□ 0.97
Samm50Q8BGH2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms