Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npas4Q8BGD7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npas4Q8BGD7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Npas4Q8BGD7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npas4Q8BGD7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Gm18959-201ENSMUST00000208954 655 ntBASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npas4Q8BGD7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npas4Q8BGD7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Gm27463-201ENSMUST00000183569 57 ntBASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Gm21362-201ENSMUST00000194272 928 ntBASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npas4Q8BGD7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Gm12085-201ENSMUST00000119263 940 ntBASIC19.1■□□□□ 0.65
Npas4Q8BGD7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Gm10517-202ENSMUST00000192970 758 ntBASIC19.1■□□□□ 0.65
Npas4Q8BGD7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npas4Q8BGD7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.09■□□□□ 0.65
Npas4Q8BGD7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms