Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc3Q8BG54 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Mir7071-201ENSMUST00000184847 69 ntBASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc3Q8BG54 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sptlc3Q8BG54 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Mir5122-201ENSMUST00000175004 89 ntBASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Gm37055-201ENSMUST00000191866 133 ntBASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc3Q8BG54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Sptlc3Q8BG54 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc3Q8BG54 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sptlc3Q8BG54 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc3Q8BG54 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Gm15565-201ENSMUST00000118890 427 ntBASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc3Q8BG54 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Sptlc3Q8BG54 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.64■■□□□ 1.06
Sptlc3Q8BG54 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sptlc3Q8BG54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc3Q8BG54 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms