Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim65Q8BFW4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim65Q8BFW4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Tgds-204ENSMUST00000228543 1594 ntBASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim65Q8BFW4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Gm12933-201ENSMUST00000120203 872 ntBASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim65Q8BFW4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim65Q8BFW4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim65Q8BFW4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Trim65Q8BFW4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim65Q8BFW4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Rarb-207ENSMUST00000225921 2756 ntBASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim65Q8BFW4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.37■□□□□ 0.69
Trim65Q8BFW4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim65Q8BFW4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms