Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trnp1Q80ZI1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Gm16061-201ENSMUST00000122167 857 ntBASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Trnp1Q80ZI1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trnp1Q80ZI1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trnp1Q80ZI1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.52■□□□□ 0.88
Trnp1Q80ZI1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Gm27704-201ENSMUST00000185094 107 ntBASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Gm4974-201ENSMUST00000209974 875 ntBASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trnp1Q80ZI1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trnp1Q80ZI1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Trnp1Q80ZI1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Gm13474-201ENSMUST00000122466 815 ntBASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trnp1Q80ZI1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms