Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp6nlQ80XC3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp6nlQ80XC3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp6nlQ80XC3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp6nlQ80XC3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Usp6nlQ80XC3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp6nlQ80XC3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Usp6nlQ80XC3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Gm6659-201ENSMUST00000174752 547 ntBASIC20■□□□□ 0.79
Usp6nlQ80XC3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20■□□□□ 0.79
Usp6nlQ80XC3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp6nlQ80XC3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp6nlQ80XC3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Usp6nlQ80XC3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms