Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vrk1Q80X41 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Gm43183-201ENSMUST00000200632 547 ntBASIC17.27■□□□□ 0.36
Vrk1Q80X41 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Gm5417-201ENSMUST00000079706 384 ntBASIC17.27■□□□□ 0.36
Vrk1Q80X41 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.27■□□□□ 0.36
Vrk1Q80X41 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vrk1Q80X41 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vrk1Q80X41 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.27■□□□□ 0.35
Vrk1Q80X41 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vrk1Q80X41 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vrk1Q80X41 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vrk1Q80X41 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.26■□□□□ 0.35
Vrk1Q80X41 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.26■□□□□ 0.35
Vrk1Q80X41 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Gm9987-201ENSMUST00000069768 567 ntBASIC17.26■□□□□ 0.35
Vrk1Q80X41 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vrk1Q80X41 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Gm15375-201ENSMUST00000119510 849 ntBASIC17.25■□□□□ 0.35
Vrk1Q80X41 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vrk1Q80X41 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Gm38285-201ENSMUST00000192928 922 ntBASIC17.24■□□□□ 0.35
Vrk1Q80X41 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vrk1Q80X41 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Gm18025-201ENSMUST00000221733 862 ntBASIC17.23■□□□□ 0.35
Vrk1Q80X41 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.23■□□□□ 0.35
Vrk1Q80X41 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.23■□□□□ 0.35
Vrk1Q80X41 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.23■□□□□ 0.35
Vrk1Q80X41 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vrk1Q80X41 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Gm42545-201ENSMUST00000202755 922 ntBASIC17.22■□□□□ 0.35
Vrk1Q80X41 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.22■□□□□ 0.35
Vrk1Q80X41 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vrk1Q80X41 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vrk1Q80X41 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vrk1Q80X41 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vrk1Q80X41 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vrk1Q80X41 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms