Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim36Q80WG7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim36Q80WG7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.48■□□□□ 0.39
Trim36Q80WG7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.48■□□□□ 0.39
Trim36Q80WG7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim36Q80WG7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim36Q80WG7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim36Q80WG7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.46■□□□□ 0.39
Trim36Q80WG7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.46■□□□□ 0.39
Trim36Q80WG7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim36Q80WG7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim36Q80WG7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim36Q80WG7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim36Q80WG7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms