Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.88■□□□□ 0.93
Prpf40bQ80W14 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf40bQ80W14 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf40bQ80W14 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.88■□□□□ 0.93
Prpf40bQ80W14 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf40bQ80W14 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf40bQ80W14 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Gm27741-201ENSMUST00000185060 237 ntBASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Prpf40bQ80W14 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Prpf40bQ80W14 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf40bQ80W14 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf40bQ80W14 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Prpf40bQ80W14 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf40bQ80W14 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Prpf40bQ80W14 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf40bQ80W14 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prpf40bQ80W14 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Prpf40bQ80W14 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms