Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Usp8Q80U87 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp8Q80U87 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Usp8Q80U87 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Usp8Q80U87 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp8Q80U87 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Usp8Q80U87 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.17■□□□□ 0.5
Usp8Q80U87 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp8Q80U87 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.16■□□□□ 0.5
Usp8Q80U87 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp8Q80U87 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.16■□□□□ 0.5
Usp8Q80U87 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp8Q80U87 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp8Q80U87 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp8Q80U87 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp8Q80U87 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp8Q80U87 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp8Q80U87 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Usp8Q80U87 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.14■□□□□ 0.5
Usp8Q80U87 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.14■□□□□ 0.49
Usp8Q80U87 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp8Q80U87 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Gm13234-201ENSMUST00000120010 747 ntBASIC18.14■□□□□ 0.49
Usp8Q80U87 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.14■□□□□ 0.49
Usp8Q80U87 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp8Q80U87 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Fst-202ENSMUST00000223640 2612 ntBASIC18.14■□□□□ 0.49
Usp8Q80U87 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp8Q80U87 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Gm13534-201ENSMUST00000121169 513 ntBASIC18.13■□□□□ 0.49
Usp8Q80U87 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.13■□□□□ 0.49
Usp8Q80U87 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp8Q80U87 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp8Q80U87 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp8Q80U87 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.12■□□□□ 0.49
Usp8Q80U87 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Usp8Q80U87 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.12■□□□□ 0.49
Usp8Q80U87 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp8Q80U87 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp8Q80U87 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp8Q80U87 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms