Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm10252-201ENSMUST00000209541 832 ntBASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh19Q80TF3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh19Q80TF3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh19Q80TF3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh19Q80TF3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdh19Q80TF3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdh19Q80TF3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh19Q80TF3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh19Q80TF3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm10698-201ENSMUST00000182663 604 ntBASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh19Q80TF3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh19Q80TF3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms