Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf38bQ80SY5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf38bQ80SY5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.89■□□□□ 0.62
Prpf38bQ80SY5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf38bQ80SY5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf38bQ80SY5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf38bQ80SY5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Gm6659-201ENSMUST00000174752 547 ntBASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf38bQ80SY5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38bQ80SY5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Gm5417-201ENSMUST00000079706 384 ntBASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Prpf38bQ80SY5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38bQ80SY5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Gm13158-201ENSMUST00000122007 736 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms