Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Gm5874-201ENSMUST00000096101 508 ntBASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdp1Q7TSG2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.74■□□□□ 0.75
Ctdp1Q7TSG2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.73■□□□□ 0.75
Ctdp1Q7TSG2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdp1Q7TSG2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdp1Q7TSG2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ctdp1Q7TSG2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms