Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm17661-201ENSMUST00000170317 270 ntBASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn10aQ6QIY3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn10aQ6QIY3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn10aQ6QIY3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn10aQ6QIY3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Gm5587-201ENSMUST00000206270 674 ntBASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn10aQ6QIY3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Gm7791-201ENSMUST00000219066 539 ntBASIC20.7■□□□□ 0.9
Scn10aQ6QIY3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn10aQ6QIY3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Gm13401-201ENSMUST00000117074 291 ntBASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Gm28033-201ENSMUST00000184224 96 ntBASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.68■□□□□ 0.9
Scn10aQ6QIY3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Mir1668-201ENSMUST00000184114 107 ntBASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn10aQ6QIY3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Gm9013-201ENSMUST00000132939 882 ntBASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn10aQ6QIY3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Gm25016-201ENSMUST00000158399 131 ntBASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn10aQ6QIY3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms