Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Gm37055-201ENSMUST00000191866 133 ntBASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Ddx58Q6Q899 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Mir5122-201ENSMUST00000175004 89 ntBASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Mir2861-201ENSMUST00000175539 82 ntBASIC22.45■■□□□ 1.18
Ddx58Q6Q899 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx58Q6Q899 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.44■■□□□ 1.18
Ddx58Q6Q899 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx58Q6Q899 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx58Q6Q899 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx58Q6Q899 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.42■■□□□ 1.18
Ddx58Q6Q899 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.42■■□□□ 1.18
Ddx58Q6Q899 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.42■■□□□ 1.18
Ddx58Q6Q899 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx58Q6Q899 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Ddx58Q6Q899 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx58Q6Q899 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Gm12382-201ENSMUST00000122005 922 ntBASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ddx58Q6Q899 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx58Q6Q899 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ddx58Q6Q899 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ddx58Q6Q899 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ddx58Q6Q899 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ddx58Q6Q899 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ddx58Q6Q899 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx58Q6Q899 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms