Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Dhx40Q6PE54 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Gm8969-201ENSMUST00000199694 526 ntBASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Dhx40Q6PE54 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Dhx40Q6PE54 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Gm13534-201ENSMUST00000121169 513 ntBASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Dhx40Q6PE54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Gm18284-201ENSMUST00000172604 624 ntBASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dhx40Q6PE54 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dhx40Q6PE54 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Dhx40Q6PE54 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dhx40Q6PE54 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms