Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim37Q6PCX9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim37Q6PCX9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim37Q6PCX9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim37Q6PCX9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim37Q6PCX9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Gm2399-201ENSMUST00000104944 225 ntBASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.08■□□□□ 0.81
Trim37Q6PCX9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim37Q6PCX9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Trim37Q6PCX9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim37Q6PCX9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim37Q6PCX9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim37Q6PCX9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim37Q6PCX9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim37Q6PCX9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim37Q6PCX9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Gm10517-202ENSMUST00000192970 758 ntBASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.04■□□□□ 0.8
Trim37Q6PCX9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Trim37Q6PCX9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Gm18101-201ENSMUST00000215769 548 ntBASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim37Q6PCX9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim37Q6PCX9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim37Q6PCX9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim37Q6PCX9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim37Q6PCX9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.02■□□□□ 0.79
Trim37Q6PCX9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim37Q6PCX9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim37Q6PCX9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim37Q6PCX9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms