Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc4Q6PAV2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Herc4Q6PAV2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
Herc4Q6PAV2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.01■□□□□ 0.79
Herc4Q6PAV2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc4Q6PAV2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.01■□□□□ 0.79
Herc4Q6PAV2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Herc4Q6PAV2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc4Q6PAV2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.99■□□□□ 0.79
Herc4Q6PAV2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc4Q6PAV2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc4Q6PAV2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc4Q6PAV2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Tgds-204ENSMUST00000228543 1594 ntBASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms