Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Hdac4Q6NZM9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Gm12933-201ENSMUST00000120203 872 ntBASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Rarb-207ENSMUST00000225921 2756 ntBASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac4Q6NZM9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac4Q6NZM9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac4Q6NZM9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Hdac4Q6NZM9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac4Q6NZM9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac4Q6NZM9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.25■□□□□ 0.83
Hdac4Q6NZM9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hdac4Q6NZM9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Gm2399-201ENSMUST00000104944 225 ntBASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Rab3c-203ENSMUST00000224180 967 ntBASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac4Q6NZM9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hdac4Q6NZM9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms