Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt39Q6IFX4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Gm10493-201ENSMUST00000097270 612 ntBASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt39Q6IFX4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Krt39Q6IFX4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Krt39Q6IFX4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Krt39Q6IFX4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20■□□□□ 0.79
Krt39Q6IFX4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt39Q6IFX4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Krt39Q6IFX4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt39Q6IFX4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt39Q6IFX4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Krt39Q6IFX4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms