Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt42Q6IFX2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt42Q6IFX2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt42Q6IFX2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt42Q6IFX2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Krt42Q6IFX2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt42Q6IFX2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt42Q6IFX2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt42Q6IFX2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt42Q6IFX2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms