Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.19■■□□□ 1.14
Col11a2Q64739 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col11a2Q64739 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col11a2Q64739 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Col11a2Q64739 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Col11a2Q64739 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Gm7791-201ENSMUST00000219066 539 ntBASIC22.18■■□□□ 1.14
Col11a2Q64739 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Col11a2Q64739 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.18■■□□□ 1.14
Col11a2Q64739 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Col11a2Q64739 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col11a2Q64739 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.17■■□□□ 1.14
Col11a2Q64739 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Gm8258-201ENSMUST00000055593 1449 ntBASIC22.17■■□□□ 1.14
Col11a2Q64739 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Col11a2Q64739 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.17■■□□□ 1.14
Col11a2Q64739 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC22.17■■□□□ 1.14
Col11a2Q64739 Gm27704-201ENSMUST00000185094 107 ntBASIC22.17■■□□□ 1.14
Col11a2Q64739 Gm29518-201ENSMUST00000190858 372 ntBASIC22.17■■□□□ 1.14
Col11a2Q64739 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col11a2Q64739 Gm9013-201ENSMUST00000132939 882 ntBASIC22.16■■□□□ 1.14
Col11a2Q64739 Gm18669-201ENSMUST00000216049 778 ntBASIC22.16■■□□□ 1.14
Col11a2Q64739 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col11a2Q64739 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.16■■□□□ 1.14
Col11a2Q64739 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col11a2Q64739 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col11a2Q64739 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col11a2Q64739 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col11a2Q64739 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC22.15■■□□□ 1.14
Col11a2Q64739 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col11a2Q64739 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col11a2Q64739 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col11a2Q64739 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Col11a2Q64739 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col11a2Q64739 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Col11a2Q64739 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Col11a2Q64739 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col11a2Q64739 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Col11a2Q64739 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.14■■□□□ 1.14
Col11a2Q64739 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col11a2Q64739 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col11a2Q64739 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Col11a2Q64739 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col11a2Q64739 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col11a2Q64739 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col11a2Q64739 Gm25016-201ENSMUST00000158399 131 ntBASIC22.14■■□□□ 1.13
Col11a2Q64739 Gm17808-201ENSMUST00000200859 894 ntBASIC22.14■■□□□ 1.13
Col11a2Q64739 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col11a2Q64739 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
Col11a2Q64739 Mir1668-201ENSMUST00000184114 107 ntBASIC22.13■■□□□ 1.13
Col11a2Q64739 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.13■■□□□ 1.13
Col11a2Q64739 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Col11a2Q64739 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.13■■□□□ 1.13
Col11a2Q64739 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col11a2Q64739 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col11a2Q64739 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.12■■□□□ 1.13
Col11a2Q64739 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col11a2Q64739 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.12■■□□□ 1.13
Col11a2Q64739 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Col11a2Q64739 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col11a2Q64739 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.11■■□□□ 1.13
Col11a2Q64739 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col11a2Q64739 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col11a2Q64739 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col11a2Q64739 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Col11a2Q64739 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col11a2Q64739 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Col11a2Q64739 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC22.11■■□□□ 1.13
Col11a2Q64739 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 Gm13401-201ENSMUST00000117074 291 ntBASIC22.1■■□□□ 1.13
Col11a2Q64739 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC22.1■■□□□ 1.13
Col11a2Q64739 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col11a2Q64739 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col11a2Q64739 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms