Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.84■□□□□ 0.45
VclQ64727 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VclQ64727 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Gm20760-201ENSMUST00000179197 648 ntBASIC17.84■□□□□ 0.45
VclQ64727 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VclQ64727 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VclQ64727 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VclQ64727 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VclQ64727 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VclQ64727 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VclQ64727 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
VclQ64727 Gm2399-201ENSMUST00000104944 225 ntBASIC17.83■□□□□ 0.44
VclQ64727 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.83■□□□□ 0.44
VclQ64727 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.83■□□□□ 0.44
VclQ64727 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.83■□□□□ 0.44
VclQ64727 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.83■□□□□ 0.44
VclQ64727 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VclQ64727 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VclQ64727 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.82■□□□□ 0.44
VclQ64727 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.82■□□□□ 0.44
VclQ64727 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VclQ64727 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
VclQ64727 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VclQ64727 Golph3-205ENSMUST00000228671 2842 ntBASIC17.81■□□□□ 0.44
VclQ64727 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Gm12896-201ENSMUST00000118430 226 ntBASIC17.81■□□□□ 0.44
VclQ64727 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VclQ64727 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.81■□□□□ 0.44
VclQ64727 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VclQ64727 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.81■□□□□ 0.44
VclQ64727 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.8■□□□□ 0.44
VclQ64727 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VclQ64727 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VclQ64727 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.8■□□□□ 0.44
VclQ64727 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VclQ64727 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VclQ64727 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VclQ64727 Gm12527-201ENSMUST00000117967 564 ntBASIC17.8■□□□□ 0.44
VclQ64727 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VclQ64727 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VclQ64727 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VclQ64727 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.8■□□□□ 0.44
VclQ64727 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.79■□□□□ 0.44
VclQ64727 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
VclQ64727 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VclQ64727 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
VclQ64727 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Gm27011-201ENSMUST00000182352 972 ntBASIC17.79■□□□□ 0.44
VclQ64727 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.79■□□□□ 0.44
VclQ64727 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
VclQ64727 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Flg-201ENSMUST00000050758 1488 ntBASIC17.79■□□□□ 0.44
VclQ64727 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.79■□□□□ 0.44
VclQ64727 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.79■□□□□ 0.44
VclQ64727 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VclQ64727 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.78■□□□□ 0.44
VclQ64727 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.78■□□□□ 0.44
VclQ64727 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.78■□□□□ 0.44
VclQ64727 Trmt13-210ENSMUST00000198454 880 ntBASIC17.78■□□□□ 0.44
VclQ64727 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.78■□□□□ 0.44
VclQ64727 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms