Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six2Q62232 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six2Q62232 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six2Q62232 Gm26524-201ENSMUST00000192339 390 ntBASIC19.35■□□□□ 0.69
Six2Q62232 Gm37179-201ENSMUST00000194862 823 ntBASIC19.35■□□□□ 0.69
Six2Q62232 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six2Q62232 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Six2Q62232 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Six2Q62232 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.34■□□□□ 0.69
Six2Q62232 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Six2Q62232 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Six2Q62232 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Six2Q62232 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Six2Q62232 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.34■□□□□ 0.69
Six2Q62232 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six2Q62232 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six2Q62232 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.33■□□□□ 0.69
Six2Q62232 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six2Q62232 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Six2Q62232 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.33■□□□□ 0.68
Six2Q62232 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Six2Q62232 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.33■□□□□ 0.68
Six2Q62232 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Six2Q62232 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six2Q62232 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six2Q62232 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six2Q62232 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six2Q62232 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Six2Q62232 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Six2Q62232 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Six2Q62232 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Six2Q62232 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six2Q62232 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Six2Q62232 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.31■□□□□ 0.68
Six2Q62232 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.31■□□□□ 0.68
Six2Q62232 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.31■□□□□ 0.68
Six2Q62232 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.31■□□□□ 0.68
Six2Q62232 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.31■□□□□ 0.68
Six2Q62232 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Six2Q62232 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.31■□□□□ 0.68
Six2Q62232 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six2Q62232 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six2Q62232 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.3■□□□□ 0.68
Six2Q62232 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.3■□□□□ 0.68
Six2Q62232 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six2Q62232 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Six2Q62232 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six2Q62232 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Six2Q62232 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Six2Q62232 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Six2Q62232 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six2Q62232 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.3■□□□□ 0.68
Six2Q62232 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Six2Q62232 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six2Q62232 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.29■□□□□ 0.68
Six2Q62232 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six2Q62232 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Six2Q62232 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Six2Q62232 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.28■□□□□ 0.68
Six2Q62232 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six2Q62232 Mir5133-201ENSMUST00000174955 77 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms