Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Scn9aQ62205 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Scn9aQ62205 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scn9aQ62205 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Gm17661-201ENSMUST00000170317 270 ntBASIC21.54■■□□□ 1.04
Scn9aQ62205 Gm2274-201ENSMUST00000184539 609 ntBASIC21.54■■□□□ 1.04
Scn9aQ62205 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn9aQ62205 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Scn9aQ62205 Mir5130-201ENSMUST00000175160 84 ntBASIC21.53■■□□□ 1.04
Scn9aQ62205 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.53■■□□□ 1.04
Scn9aQ62205 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn9aQ62205 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn9aQ62205 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn9aQ62205 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn9aQ62205 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Scn9aQ62205 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scn9aQ62205 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn9aQ62205 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn9aQ62205 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn9aQ62205 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.52■■□□□ 1.04
Scn9aQ62205 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Scn9aQ62205 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Scn9aQ62205 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn9aQ62205 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn9aQ62205 Gm22697-201ENSMUST00000175194 63 ntBASIC21.52■■□□□ 1.04
Scn9aQ62205 Gm28033-201ENSMUST00000184224 96 ntBASIC21.52■■□□□ 1.04
Scn9aQ62205 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.52■■□□□ 1.04
Scn9aQ62205 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scn9aQ62205 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn9aQ62205 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn9aQ62205 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn9aQ62205 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn9aQ62205 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn9aQ62205 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.5■■□□□ 1.03
Scn9aQ62205 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Scn9aQ62205 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Scn9aQ62205 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scn9aQ62205 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn9aQ62205 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.49■■□□□ 1.03
Scn9aQ62205 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn9aQ62205 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Scn9aQ62205 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn9aQ62205 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.48■■□□□ 1.03
Scn9aQ62205 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.48■■□□□ 1.03
Scn9aQ62205 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Scn9aQ62205 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scn9aQ62205 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.48■■□□□ 1.03
Scn9aQ62205 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn9aQ62205 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn9aQ62205 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.47■■□□□ 1.03
Scn9aQ62205 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scn9aQ62205 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn9aQ62205 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.47■■□□□ 1.03
Scn9aQ62205 Gm7461-201ENSMUST00000058918 827 ntBASIC21.47■■□□□ 1.03
Scn9aQ62205 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Scn9aQ62205 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.46■■□□□ 1.03
Scn9aQ62205 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Gm25016-201ENSMUST00000158399 131 ntBASIC21.46■■□□□ 1.03
Scn9aQ62205 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.46■■□□□ 1.03
Scn9aQ62205 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scn9aQ62205 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.46■■□□□ 1.03
Scn9aQ62205 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn9aQ62205 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scn9aQ62205 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn9aQ62205 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn9aQ62205 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.45■■□□□ 1.02
Scn9aQ62205 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn9aQ62205 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.45■■□□□ 1.02
Scn9aQ62205 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms