Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SspnQ62147 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.15■□□□□ 0.02
SspnQ62147 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SspnQ62147 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.15■□□□□ 0.02
SspnQ62147 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SspnQ62147 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Haglr-201ENSMUST00000100000 2085 ntBASIC15.15■□□□□ 0.02
SspnQ62147 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SspnQ62147 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SspnQ62147 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.14■□□□□ 0.01
SspnQ62147 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
SspnQ62147 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
SspnQ62147 Gm13146-201ENSMUST00000118508 780 ntBASIC15.14■□□□□ 0.01
SspnQ62147 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.14■□□□□ 0.01
SspnQ62147 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.14■□□□□ 0.01
SspnQ62147 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SspnQ62147 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SspnQ62147 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.13■□□□□ 0.01
SspnQ62147 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.13■□□□□ 0.01
SspnQ62147 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.13■□□□□ 0.01
SspnQ62147 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.13■□□□□ 0.01
SspnQ62147 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SspnQ62147 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SspnQ62147 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SspnQ62147 Gm10493-201ENSMUST00000097270 612 ntBASIC15.12■□□□□ 0.01
SspnQ62147 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
SspnQ62147 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SspnQ62147 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SspnQ62147 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms