Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Foxc1Q61572 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Foxc1Q61572 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Foxc1Q61572 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Foxc1Q61572 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Foxc1Q61572 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.26□□□□□ -0.29
Foxc1Q61572 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Foxc1Q61572 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Foxc1Q61572 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Foxc1Q61572 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Foxc1Q61572 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Foxc1Q61572 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Foxc1Q61572 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Foxc1Q61572 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Foxc1Q61572 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.25□□□□□ -0.29
Foxc1Q61572 Golph3-205ENSMUST00000228671 2842 ntBASIC13.25□□□□□ -0.29
Foxc1Q61572 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Foxc1Q61572 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Trmt13-210ENSMUST00000198454 880 ntBASIC13.24□□□□□ -0.29
Foxc1Q61572 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Foxc1Q61572 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.24□□□□□ -0.29
Foxc1Q61572 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Foxc1Q61572 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Foxc1Q61572 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Gm6211-202ENSMUST00000167849 925 ntBASIC13.23□□□□□ -0.29
Foxc1Q61572 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.23□□□□□ -0.29
Foxc1Q61572 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxc1Q61572 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxc1Q61572 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms