Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cln3Q61124 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cln3Q61124 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cln3Q61124 Gm10819-201ENSMUST00000099988 561 ntBASIC19.98■□□□□ 0.79
Cln3Q61124 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.98■□□□□ 0.79
Cln3Q61124 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cln3Q61124 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cln3Q61124 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cln3Q61124 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cln3Q61124 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.97■□□□□ 0.79
Cln3Q61124 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.97■□□□□ 0.79
Cln3Q61124 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cln3Q61124 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln3Q61124 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.96■□□□□ 0.79
Cln3Q61124 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.96■□□□□ 0.79
Cln3Q61124 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cln3Q61124 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.96■□□□□ 0.79
Cln3Q61124 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln3Q61124 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.95■□□□□ 0.78
Cln3Q61124 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cln3Q61124 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cln3Q61124 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cln3Q61124 Gm21362-201ENSMUST00000194272 928 ntBASIC19.95■□□□□ 0.78
Cln3Q61124 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.95■□□□□ 0.78
Cln3Q61124 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln3Q61124 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cln3Q61124 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cln3Q61124 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.94■□□□□ 0.78
Cln3Q61124 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cln3Q61124 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.94■□□□□ 0.78
Cln3Q61124 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Cln3Q61124 Gm10517-202ENSMUST00000192970 758 ntBASIC19.94■□□□□ 0.78
Cln3Q61124 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cln3Q61124 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cln3Q61124 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cln3Q61124 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cln3Q61124 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.93■□□□□ 0.78
Cln3Q61124 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.93■□□□□ 0.78
Cln3Q61124 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Cln3Q61124 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cln3Q61124 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.93■□□□□ 0.78
Cln3Q61124 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.93■□□□□ 0.78
Cln3Q61124 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cln3Q61124 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Cln3Q61124 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cln3Q61124 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cln3Q61124 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cln3Q61124 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.92■□□□□ 0.78
Cln3Q61124 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.92■□□□□ 0.78
Cln3Q61124 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cln3Q61124 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cln3Q61124 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cln3Q61124 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.91■□□□□ 0.78
Cln3Q61124 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.91■□□□□ 0.78
Cln3Q61124 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.91■□□□□ 0.78
Cln3Q61124 Gm18959-201ENSMUST00000208954 655 ntBASIC19.91■□□□□ 0.78
Cln3Q61124 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.91■□□□□ 0.78
Cln3Q61124 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cln3Q61124 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cln3Q61124 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.9■□□□□ 0.78
Cln3Q61124 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms