Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scarb1Q61009 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scarb1Q61009 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scarb1Q61009 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scarb1Q61009 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scarb1Q61009 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
Scarb1Q61009 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scarb1Q61009 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Scarb1Q61009 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.27■□□□□ 0.03
Scarb1Q61009 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scarb1Q61009 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.26■□□□□ 0.03
Scarb1Q61009 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.26■□□□□ 0.03
Scarb1Q61009 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.26■□□□□ 0.03
Scarb1Q61009 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.26■□□□□ 0.03
Scarb1Q61009 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.26■□□□□ 0.03
Scarb1Q61009 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scarb1Q61009 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.26■□□□□ 0.03
Scarb1Q61009 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scarb1Q61009 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scarb1Q61009 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.25■□□□□ 0.03
Scarb1Q61009 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.25■□□□□ 0.03
Scarb1Q61009 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
Scarb1Q61009 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scarb1Q61009 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scarb1Q61009 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scarb1Q61009 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Gm43137-201ENSMUST00000198052 594 ntBASIC15.24■□□□□ 0.03
Scarb1Q61009 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scarb1Q61009 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.24■□□□□ 0.03
Scarb1Q61009 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms