Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.58■□□□□ 0.56
Slc6a4Q60857 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.57■□□□□ 0.56
Slc6a4Q60857 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a4Q60857 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.56■□□□□ 0.56
Slc6a4Q60857 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Gm15375-201ENSMUST00000119510 849 ntBASIC18.56■□□□□ 0.56
Slc6a4Q60857 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.56■□□□□ 0.56
Slc6a4Q60857 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a4Q60857 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.55■□□□□ 0.56
Slc6a4Q60857 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.55■□□□□ 0.56
Slc6a4Q60857 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc6a4Q60857 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a4Q60857 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Gm6576-201ENSMUST00000169678 883 ntBASIC18.53■□□□□ 0.56
Slc6a4Q60857 Gm42545-201ENSMUST00000202755 922 ntBASIC18.53■□□□□ 0.56
Slc6a4Q60857 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a4Q60857 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Gm18025-201ENSMUST00000221733 862 ntBASIC18.52■□□□□ 0.56
Slc6a4Q60857 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a4Q60857 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a4Q60857 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms