Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col12a1Q60847 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Col12a1Q60847 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.03■□□□□ 0.48
Col12a1Q60847 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col12a1Q60847 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Col12a1Q60847 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Col12a1Q60847 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col12a1Q60847 Gm38285-201ENSMUST00000192928 922 ntBASIC18.02■□□□□ 0.48
Col12a1Q60847 Gm17808-201ENSMUST00000200859 894 ntBASIC18.02■□□□□ 0.48
Col12a1Q60847 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.02■□□□□ 0.48
Col12a1Q60847 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col12a1Q60847 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col12a1Q60847 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col12a1Q60847 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.01■□□□□ 0.47
Col12a1Q60847 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Gm16061-201ENSMUST00000122167 857 ntBASIC18.01■□□□□ 0.47
Col12a1Q60847 Gm27357-201ENSMUST00000183754 135 ntBASIC18.01■□□□□ 0.47
Col12a1Q60847 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col12a1Q60847 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.01■□□□□ 0.47
Col12a1Q60847 Gm7791-201ENSMUST00000219066 539 ntBASIC18.01■□□□□ 0.47
Col12a1Q60847 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Col12a1Q60847 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18■□□□□ 0.47
Col12a1Q60847 Birc2-201ENSMUST00000054878 378 ntBASIC18■□□□□ 0.47
Col12a1Q60847 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col12a1Q60847 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col12a1Q60847 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col12a1Q60847 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Col12a1Q60847 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.99■□□□□ 0.47
Col12a1Q60847 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.99■□□□□ 0.47
Col12a1Q60847 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.99■□□□□ 0.47
Col12a1Q60847 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col12a1Q60847 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col12a1Q60847 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.99■□□□□ 0.47
Col12a1Q60847 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col12a1Q60847 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.98■□□□□ 0.47
Col12a1Q60847 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col12a1Q60847 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col12a1Q60847 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.98■□□□□ 0.47
Col12a1Q60847 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.98■□□□□ 0.47
Col12a1Q60847 Mir3081-201ENSMUST00000175305 84 ntBASIC17.98■□□□□ 0.47
Col12a1Q60847 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col12a1Q60847 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col12a1Q60847 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Gm27742-201ENSMUST00000184667 60 ntBASIC17.97■□□□□ 0.47
Col12a1Q60847 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.97■□□□□ 0.47
Col12a1Q60847 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col12a1Q60847 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Gm37935-201ENSMUST00000192012 982 ntBASIC17.97■□□□□ 0.47
Col12a1Q60847 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.97■□□□□ 0.47
Col12a1Q60847 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col12a1Q60847 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.97■□□□□ 0.47
Col12a1Q60847 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col12a1Q60847 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col12a1Q60847 Gm27459-201ENSMUST00000184860 107 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms