Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.34■□□□□ 0.37
Xrcc1Q60596 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Xrcc1Q60596 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.33■□□□□ 0.36
Xrcc1Q60596 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Gm10653-202ENSMUST00000139570 835 ntBASIC17.33■□□□□ 0.36
Xrcc1Q60596 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Gm27011-201ENSMUST00000182352 972 ntBASIC17.33■□□□□ 0.36
Xrcc1Q60596 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Xrcc1Q60596 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.32■□□□□ 0.36
Xrcc1Q60596 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Gm37856-201ENSMUST00000191634 999 ntBASIC17.32■□□□□ 0.36
Xrcc1Q60596 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.32■□□□□ 0.36
Xrcc1Q60596 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xrcc1Q60596 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.3■□□□□ 0.36
Xrcc1Q60596 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.3■□□□□ 0.36
Xrcc1Q60596 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Xrcc1Q60596 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.29■□□□□ 0.36
Xrcc1Q60596 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.29■□□□□ 0.36
Xrcc1Q60596 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Flg-201ENSMUST00000050758 1488 ntBASIC17.29■□□□□ 0.36
Xrcc1Q60596 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms