Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85aQ5SP85 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85aQ5SP85 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85aQ5SP85 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Gm14859-201ENSMUST00000117752 357 ntBASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Gm18032-201ENSMUST00000222541 538 ntBASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85aQ5SP85 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Gm27463-201ENSMUST00000183569 57 ntBASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85aQ5SP85 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Mir5130-201ENSMUST00000175160 84 ntBASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85aQ5SP85 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc85aQ5SP85 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc85aQ5SP85 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc85aQ5SP85 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Gm9103-201ENSMUST00000119371 405 ntBASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85aQ5SP85 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85aQ5SP85 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85aQ5SP85 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc85aQ5SP85 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc85aQ5SP85 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85aQ5SP85 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85aQ5SP85 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85aQ5SP85 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85aQ5SP85 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms