Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Gm11927-201ENSMUST00000118472 759 ntBASIC14.44□□□□□ -0.1
Trav2Q5R1I9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav2Q5R1I9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Gm15378-201ENSMUST00000121894 207 ntBASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav2Q5R1I9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav2Q5R1I9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Zfp783-201ENSMUST00000095946 670 ntBASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav2Q5R1I9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms