Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-1Q5R1I8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-1Q5R1I8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-1Q5R1I8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav3-1Q5R1I8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav3-1Q5R1I8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav3-1Q5R1I8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-1Q5R1I8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-1Q5R1I8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms