Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Gm9988-201ENSMUST00000069786 435 ntBASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-3Q5R1I1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav7d-3Q5R1I1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav7d-3Q5R1I1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-3Q5R1I1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-3Q5R1I1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-3Q5R1I1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav7d-3Q5R1I1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav7d-3Q5R1I1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms