Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-3Q5R1E6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Gm22325-201ENSMUST00000158904 308 ntBASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-3Q5R1E6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Gm8969-201ENSMUST00000199694 526 ntBASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-3Q5R1E6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-3Q5R1E6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-3Q5R1E6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Gm42778-201ENSMUST00000199644 553 ntBASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-3Q5R1E6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.52□□□□□ -0.08
Trav6-3Q5R1E6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms