Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Gm14822-201ENSMUST00000122247 291 ntBASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Herc2Q4U2R1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Herc2Q4U2R1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Gm45328-201ENSMUST00000210942 917 ntBASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Herc2Q4U2R1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Gm15165-201ENSMUST00000118140 502 ntBASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Gm27321-201ENSMUST00000185021 205 ntBASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Gm7638-201ENSMUST00000121348 967 ntBASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Herc2Q4U2R1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Gm11779-201ENSMUST00000118541 368 ntBASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Herc2Q4U2R1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms