Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lin28bQ45KJ6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.21■□□□□ 0.35
Lin28bQ45KJ6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lin28bQ45KJ6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lin28bQ45KJ6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lin28bQ45KJ6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Gm13836-201ENSMUST00000121159 501 ntBASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Gm43183-201ENSMUST00000200632 547 ntBASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin28bQ45KJ6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Gm7977-201ENSMUST00000193787 748 ntBASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.19■□□□□ 0.34
Lin28bQ45KJ6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Gm42545-201ENSMUST00000202755 922 ntBASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Lin28bQ45KJ6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lin28bQ45KJ6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms