Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Mir2861-201ENSMUST00000175539 82 ntBASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Gm37055-201ENSMUST00000191866 133 ntBASIC19.62■□□□□ 0.73
Snx27Q3UHD6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx27Q3UHD6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Mir5122-201ENSMUST00000175004 89 ntBASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx27Q3UHD6 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.6■□□□□ 0.73
Snx27Q3UHD6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snx27Q3UHD6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.58■□□□□ 0.73
Snx27Q3UHD6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.58■□□□□ 0.73
Snx27Q3UHD6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx27Q3UHD6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx27Q3UHD6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snx27Q3UHD6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snx27Q3UHD6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Gm12382-201ENSMUST00000122005 922 ntBASIC19.57■□□□□ 0.72
Snx27Q3UHD6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snx27Q3UHD6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Snx27Q3UHD6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Snx27Q3UHD6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Snx27Q3UHD6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Snx27Q3UHD6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms